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Genome Analysis
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Nematode Analysis
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Rice-Arabidopsis comparison
Non-negative matrix factorization (NMF) for sequence analysis

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NIH

nigms

Systematic Variation in mRNA 3'-processing signals during mouse spermatogenesis.

Supplemental Results

File Downloads:

  • "3'-UTR" are full 3'-UTR sequences in a fasta format with the headers in the format >chr#:genomic seq start:genomic seq stop:pac:trc:gene id:tri:trf:NCBI taxonomy id for organism:grp
  • "Flanking seqs." are fasta formatted sequences plus/minus 200 nt from the putative cleavage site.
Cell Type
Sequence Type
Round3'-UTRFlanking seqs.
Sertoli3'-UTRFlanking seqs.
Spermatogonia3'-UTRFlanking seqs.
Pachytene3'-UTRFlanking seqs.
Universe Set3'-UTRFlanking seqs.
PeritubularN.A.Flanking seqs.

Supplemental Figures:

Supplemental Tables: