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  Element Positions
   Nucleotide Frequency


Comments, Questions to Joel Graber


Complete list of overlapping pairs of ORFs

ORF 1 ORF 2
ID Name Max
log10(DSM)
ID Name Max
log10(DSM)
YCR048W ARE1 5.75488 YCR050C   2.34433
YCL041C   1.57669 YCL042W   2.05709
YDL173W   5.34011 YDL172C   2.28602
YLR463C   3.16961 YLR464W   3.11899
YOR378W   3.97201 YOR379C   2.22662
YOL151W GRE2 4.49223 YOL150C   2.417
YBL095W   4.15656 YBL094C   2.04757
YLR197W SIK1 6.05634 YLR198C   3.00441
YLR100W ERG27 4.70296 YLR101C   3.51332
YDR412W   4.25817 YDR413C   3.23683
YNL171C   4.30616 YNL170W   2.71523
YJR019C TES1 4.61208 YJR020W   3.88964
YMR086W   4.33771 YMR086C-A   2.79257
YJL016W   4.38285 YJL015C   3.24377
YNL297C MON2 4.12104 YNL296W   3.01996
YLR357W RSC2 4.34935 YLR358C   2.42275
YLR464W   3.11899 YLR465C   4.10077
YDL119C   4.92714 YDL118W   3.17498
YMR135C   3.3698 YMR135W-A   2.78705
YGR268C   3.24852 YGR269W   3.54993
YGR181W TIM13 6.38063 YGR182C   3.77681
YGL153W PEX14 3.17163 YGL152C   3.9648
YMR244C-A   4.91381 YMR245W   4.16853
YMR031C   5.22756 YMR031W-A   2.42538
YOL100W PKH2 3.2724 YOL099C   3.19775
YDR270W CCC2 4.07565 YDR271C   3.43937
YMR306W FKS3 3.11679 YMR306C-A   3.83988
YDL033C   5.31937 YDL032W   2.47268
YEL067C   2.42504 YEL066W HPA3 4.56449
YIL059C   3.36375 YIL058W   3.35206
YLR457C NBP1 4.63208 YLR458W   3.80294
YKR040C   3.31574 YKR041W   2.93231
YOR054C   3.09807 YOR055W   3.40659
YJL076W NET1 4.6003 YJL075C   2.4048
YDR526C   2.30882 YDR527W   5.04127
YLR462W   4.46494 YLR463C   3.16961
YDL010W   4.66892 YDL009C   3.8892
YPR075C OPY2 6.01154 YPR076W   3.07372
YMR172W HOT1 3.28082 YMR172C-A   3.12091
YCL024W KCC4 5.09868 YCL022C   3.69725
YNL228W   2.84945 YNL227C   4.24889
YPR125W   4.44701 YPR126C   3.20996
YNL150W   2.69158 YNL149C   4.02619
YBR133C HSL7 3.69643 YBR134W   3.1625
YGR017W   4.08631 YGR018C   2.98526
YJR022W LSM8 3.98889 YJR023C   4.18975
YLR443W ECM7 5.91953 YLR444C   3.03899
YPL018W CTF19 3.76859 YPL017C   3.45657
YOR324C   3.76689 YOR325W   3.4218
YMR290C HAS1 4.47809 YMR290W-A   3.82722
YJL023C PET130 4.56102 YJL022W   3.23878
YMR158W-A   2.05476 YMR159C APG16 4.28669
YDL153C SAS10 4.18838 YDL152W   3.4846
YDR094W   3.36084 YDR095C   2.93527
YDR520C   3.68661 YDR521W   4.59728
YJR036C HUL4 4.00282 YJR037W   3.66548
YDR111C   4.40977 YDR112W   2.98321
YOR281C PLP2 3.58773 YOR282W   3.0317
YNL014W   4.84311 YNL013C   3.21327
YOR041C   3.72049 YOR042W   3.79467
YDL035C GPR1 4.34418 YDL034W   3.62899
YBR223C   4.33073 YBR224W   2.0899
YOR364W   2.88684 YOR365C   4.03258
YOR263C   2.99621 YOR264W   3.63516
YKL053W   2.55753 YKL052C   3.80434
YOL036W   4.65723 YOL035C   3.7722
YPR091C   4.04173 YPR092W   4.70219
YBR050C REG2 4.06895 YBR051W   3.5114
YDR466W   4.23559 YDR467C   3.67124
YNL106C INP52 3.33001 YNL105W   3.53506
YDR508C GNP1 3.96395 YDR509W   3.74963
YBR225W   4.21747 YBR226C   4.21898
YDR289C RTT103 4.50714 YDR290W   3.49239
YDR425W   5.61582 YDR426C   3.59932
YJL152W   2.22082 YJL151C   3.17153
YDR444W   3.81406 YDR445C   3.31838
YJL221C FSP2 3.81836 YJL220W   4.59549
YOR365C   4.03258 YOR366W   3.33109
YNL029C KTR5 5.0928 YNL028W   3.34751
YNR024W   4.58251 YNR025C   3.15559
YGR068C   5.97526 YGR069W   4.79923
YER066C-A   3.38115 YER067W   3.50575
YML090W   2.51811 YML089C   3.89353
YLR360W VPS38 4.14032 YLR361C   3.14169
YGL109W   3.29243 YGL108C   3.43015
YLR282C   1.97828 YLR283W   3.40837
YMR316C-B   3.10143 YMR317W   4.45989
YPR043W RPL43A 5.58888 YPR044C   2.76058
YPL114W   3.8687 YPL113C   3.87817
YMR153W NUP53 5.09256 YMR153C-A   5.4055
YPR037C   3.52937 YPR038W   2.86178
YNL175C NOP13 4.22688 YNL174W   4.36898
YGL236C MTO1 4.6104 YGL235W   4.41326
YDR407C TRS120 4.0804 YDL244W THI13 3.49653
YPL035C   4.70778 YPL034W   3.14351
YAR030C   2.9429 YAR031W PRM9 3.34543
YLR269C   3.04068 YLR270W   3.93422
YJR087W   3.84019 YJR088C   3.69866
YGL217C   3.67542 YGL216W KIP3 4.44488
YBL066C SEF1 4.22696 YBL065W   3.53675
YMR075W   4.83123 YMR075C-A   4.09919
YER083C   3.99955 YER084W   4.42915
YNL044W YIP3 3.87636 YNL043C   3.09462
YCR064C   3.87343 YCR063W   3.90297
YLR316C TAD3 2.85334 YLR317W   3.62928
YKL037W   3.33685 YKL036C   3.63227
YJL065C   2.2708 YJL064W   3.70367
YLR321C SFH1 4.30587 YLR322W   3.44515
YOL080C REX4 3.96475 YOL079W   3.55167
YPL137C   4.10672 YPL136W   4.06749
YBL096C   3.46768 YBL095W   4.15656
YDL071C   3.96632 YDL070W BDF2 4.31061
YGL132W   3.9482 YGL131C   3.97241
YPL166W   3.12434 YPL165C   3.75175
YBR063C   4.02581 YBR064W   4.3329
YGL219C   4.31142 YGL218W   3.90534
YLR216C CPR6 5.47888 YLR217W   3.98264
YDR359C VID21 4.23342 YDR360W   3.21968
YMR316W DIA1 3.85313 YMR316C-A   4.40133
YNL172W APC1 4.74027 YNL171C   4.30616
YJR038C   2.93884 YJR039W   3.549
YFR056C   4.4121 YFR055W   2.77191
YPR197C   3.91675 YPR198W SGE1 3.79289
YIL060W   3.61974 YIL059C   3.36375
YDR048C   4.68925 YDR049W   5.09283
YJL067W   2.01671 YJL066C   3.76422
YJL119C   3.56865 YJL118W   4.78146
YJR070C   5.28155 YJR071W   4.35903
YBR099C   4.77085 YBR100W   4.14192
YBR177C EHT1 5.38376 YBR178W   4.53792
YDR240C SNU56 4.76032 YDR241W   3.66054
YDL063C   4.36532 YDL062W   4.06958
YJL169W   3.4438 YJL168C SET2 3.65119
YBR266C   3.23839 YBR267W   3.40841
YDL162C   3.01947 YDL161W ENT1 3.10716
YKL202W   3.52291 YKL201C MNN4 3.82845
YLR465C   4.10077 YLR466W YRF1-4 5.42369
YPL073C   5.3074 YPL072W UBP16 3.3942
YPR136C   5.11102 YPR137W RRP9 4.39768
YLR428C   3.85104 YLR429W CRN1 4.50035
YOR082C   3.29632 YOR083W   4.64407
YOR145C   4.47555 YOR146W   5.16235
YDR008C   2.69434 YDR007W TRP1 4.26006
YNL227C   4.24889 YNL226W   3.9839
YBL012C   3.6851 YBL011W SCT1 4.30435
YDR202C RAV2 4.08772 YDR203W   3.98325
YDR396W   3.38995 YDR397C NCB2 4.96075
YJR113C RSM7 4.97062 YJR114W   3.49678
YNL120C   3.64082 YNL119W   3.75625
YLR434C   3.07532 YLR435W   4.76975
YDR209C   2.91297 YDR210W   3.91921
YLR374C   1.97498 YLR375W STP3 3.86566
YLR040C   4.72913 YLR041W   3.57482
YDR230W   2.67797 YDR231C COX20 4.67486
YDR430C   4.79148 YDR431W   3.7288
YDR199W   3.33175 YDR200C   4.63457
YDR455C   2.95878 YDR456W NHX1 4.03643
YOR225W   2.56235 YOR226C ISU2 3.70638
YGL069C   2.83912 YGL068W   4.39483
YCR087W   3.81731 YCR087C-A   4.16767
YLR348C DIC1 4.0139 YLR349W   5.22874
YPR099C   4.72665 YPR100W   4.75948
YOL037C   4.59278 YOL036W   4.65723
YOR053W   3.21665 YOR054C   3.09807
YGL199C   2.53664 YGL198W   3.59962
YPR142C   3.77744 YPR143W   4.22369
YOL046C   4.44239 YOL045W   4.42909
YDR491C   3.01654 YDR492W   5.25259
YJL086C   3.24955 YJL085W EXO70 2.93324
YGR259C   3.48563 YGR260W TNA1 4.93565
YDL011C   2.75261 YDL010W   4.66892
YNL266W   3.99866 YNL265C IST1 5.06505
YOL134C   2.18071 YOL133W HRT1 3.88324
YGL025C PGD1 5.34773 YGL024W   3.79782
YDL187C   3.83107 YDL186W   4.54372
YPL186C   4.32248 YPL185W   3.77619
YGR293C   3.13835 YGR294W   5.29001
YJL182C   4.08918 YJL181W   4.21117
YPL261C   3.59371 YPL260W   4.48763
YPL102C   3.97465 YPL101W   3.49877
YBR300C   3.0964 YBR301W   5.24298
YKL036C   3.63227 YKL035W UGP1 4.42598
YLR231C   3.91076 YLR232W   5.09413
YLR279W   3.60182 YLR280C   4.36213
YFL013W-A   5.153 YFL013C   5.73864
YBR174C   3.43505 YBR175W   4.67969
YNL058C   4.42761 YNL057W   4.7149
YHR021W-A ECM12 2.93149 YHR022C   5.15565
YGR241C YAP1802 4.06343 YGR242W   2.48525
YPR050C   3.73671 YPR051W MAK3 3.22414
YPR150W   3.67128 YPR151C   4.14049
YDR269C   3.23506 YDR270W CCC2 4.07565
YPL182C   3.57341 YPL181W   5.89335
YKL132C RMA1 3.60491 YKL131W   4.46267
YJR079W   2.90056 YJR080C   4.05927
YCL023C   3.73363 YCL024W KCC4 5.09868
YMR294W-A   3.13086 YMR295C   4.14884
YDR512C   4.11865 YDR513W TTR1 4.18697
YBL053W   3.39714 YBL052C SAS3 4.22325
YDL027C   4.15629 YDL026W   5.24888
YDR114C   3.04846 YDR115W   4.92423
YGR022C   3.756 YGR023W MTL1 5.13427
YNL325C FIG4 4.87199 YNL324W   3.14634
YKL147C   3.04256 YKL146W   4.33781
YOR170W   3.50869 YOR171C LCB4 4.86771
YKL178C STE3 4.96799 YKL177W   4.24364
YPL252C YAH1 5.20956 YPL251W   5.25695
YCL045C   5.36596 YCL046W   4.34984
YCR049C   2.40165 YCR048W ARE1 5.75488
YNL109W   3.94732 YNL108C   4.45602
YGR176W   3.47835 YGR177C ATF2 4.98078
YKL083W   2.9968 YKL082C   5.79416
YBL113C   5.35565 YBL112C   1.32088
YPR038W   2.86178 YPR039W   2.15715
YLR235C   2.3497 YLR236C   3.36414
YKL199C YKT9 4.63626 YKL198C PTK1 2.61589
YOR199W   3.49947 YOR200W   2.20631
YPR202W   3.39772 YPR203W   1.97603
YFL065C   1.97603 YFL064C   3.18082
YLR201C   4.73224 YLR202C   3.12213
YHR214C-B   3.60904 YHR214C-C   2.93229
YOR299W BUD7 3.65869 YOR300W   2.65328
YJL108C PRM10 4.32432 YJL107C   2.99445
YCL076W   3.54201 YCL075W   2.97546
YCR099C   4.43538 YCR100C   3.08655
YNL185C MRPL19 4.47736 YNL184C   3.51423
YLR122C   3.0019 YLR123C   2.89185
YLL053C   4.40753 YLL052C AQY2 3.52482
YKL116C   4.89135 YKL115C   3.51155
YPR077C   3.96126 YPR078C   3.96504
YJR146W   2.21086 YJR147W HMS2 3.18985
YJL019W   2.60732 YJL018W   3.4264
YDR093W   3.32699 YDR094W   3.36084
YLR415C   3.71126 YLR416C   3.07026
YBR012W-A   2.91437 YBR012W-B   3.42384
YCR040W MATALPHA1 3.97878 YCR041W   4.51439
YIL175W   2.46571 YIL174W   3.42557
YPL276W   3.46246 YPL275W   3.56927
YFL043C   4.23102 YFL042C   3.75095
YGR010W   3.80291 YGR011W   4.19951
YLR251W   3.10688 YLR252W   3.49798
YPR039W   2.15715 YPR040W   4.21662
YJL135W   3.23285 YJL134W LCB3 3.49748
YOR012W   5.29233 YOR013W   5.26112
YGR114C   3.67627 YGR115C   4.8819
YOR104W   4.57993 YOR105W   4.54479
YLR294C   3.60809 YLR295C ATP14 4.04373
YER189W   4.26211 YER190W YRF1-2 5.45141
YER097W   3.28702 YER098W UBP9 4.0366
YPR089W   3.12861 YPR090W   3.09142
YDL245C HXT15 4.76834 YDR407C TRS120 4.0804
YDL039C PRM7 3.88261 YDL038C   2.83128
YKL076C   3.06292 YKL075C   3.51083
YIL141W   4.07985 YIL140W SRO4 3.33057
YPR146C   5.93592 YPR147C   4.48548
YGL052W   3.40225 YGL051W   2.91845
YOR309C   4.2014 YOR310C NOP58 4.20119
YNL304W YPT11 4.60596 YNL303W   4.67775
YGR136W   4.06942 YGR137W   4.12102
YBR224W   2.0899 YBR225W   4.21747
YMR119W   4.07794 YMR119W-A   3.87965
YLR280C   4.36213 YLR281C   4.29538
YDR133C   5.02986 YDR134C   5.02955
YJL150W   2.78834 YJL149W   4.86032
YOR247W SRL1 5.24755 YOR248W TOS11 5.25612
YMR304C-A   3.96578 YMR305C SCW10 4.24955
YKL124W SSH4 5.30278 YKL123W   5.26931
YOR087W   2.57959 YOR088W   4.48135
YCR012W PGK1 4.91709 YCR013C   2.06183
YDL229W SSB1 5.28794 YDL228C   2.23537
YKL029C MAE1 4.43304 YKL030W   2.20529
YKR048C NAP1 4.1609 YKR047W   1.92987
YLR234W TOP3 3.44758 YLR235C   2.3497
YNL277W MET2 5.04353 YNL276C   2.92714
YOR201C PET56 4.77148 YOR200W   2.20631
YPR058W YMC1 3.80756 YPR059C   2.73932
YDL164C CDC9 4.18497 YDL163W   3.80878
YDL051W LHP1 5.185 YDL050C   3.04123
YDL220C CDC13 4.51368 YDL221W   3.57785
YOR120W GCY1 3.8403 YOR121C   2.91798
YBR112C CYC8 4.86695 YBR113W   1.8039
YNL169C PSD1 4.76105 YNL170W   2.71523
YDL017W CDC7 4.34098 YDL016C   3.41585
YJL203W PRP21 3.88549 YJL202C   3.94113
YGR229C SMI1 4.61527 YGR228W   2.76693
YLR378C SEC61 4.53957 YLR379W   2.44358
YGL213C SKI8 4.34931 YGL214W   2.6732
YGL166W CUP2 3.87751 YGL165C   2.27275
YBL076C ILS1 3.0019 YBL077W   2.67425
YPR088C SRP54 5.10673 YPR087W   2.4075
YER120W SCS2 3.96026 YER119C-A   2.5967
YDL095W PMT1 3.46475 YDL096C   3.11967
YOR217W RFC1 3.65136 YOR218C   3.2299
YIL162W SUC2 5.17765 YIL163C   3.15935
YJL031C BET4 4.48138 YJL032W   3.85944
YDR188W CCT6 5.77474 YDR187C   1.79516
YAR029W   5.00506 YAR030C   2.9429
YDR137W RGP1 4.35101 YDR136C   2.45743
YPR129W SCD6 3.72724 YPR130C   2.45552
YGR159C NSR1 4.02696 YGR160W   3.05695
YGR220C MRPL9 4.6979 YGR219W   3.00525
YDR402C DIT2 4.10809 YDR401W   2.45721
YKR013W PRY2 5.80699 YKR012C   3.6016
YLR075W RPL10 4.16977 YLR076C   3.21694
YOR168W GLN4 4.56161 YOR169C   3.58347
YDR328C SKP1 3.57837 YDR327W   3.01399
YBR233W PBP2 4.91409 YBR232C   3.98646
YNL202W SPS19 4.2268 YNL203C   3.26942
YGR264C MES1 5.31364 YGR265W   3.42296
YOR332W VMA4 5.19237 YOR331C   3.11264
YKL119C VPH2 3.41238 YKL118W   2.89834
YGL043W DST1 4.3858 YGL042C   3.46424
YGL150C INO80 4.36663 YGL149W   3.38956
YDR538W PAD1 3.87916 YDR537C   3.78373
YNR041C COQ2 3.68756 YNR042W   3.40448
YJL008C CCT8 4.34715 YJL009W   2.97711
YDL159W STE7 5.35208 YDL158C   2.97894
YGL073W HSF1 2.62769 YGL072C